Uploading files for secondary analysis

In order to launch secondary analysis at Nostos, the input files (FASTQ) need to be made available in Nostos' AWS S3 storage where the secondary pipeline can access them for processing.

To help this process, a command line interface (CLI) is provided during the onboarding process. This CLI allows automatising the transfer of FASTQ files in an easy and secure way either from users local file server, or another AWS cloud storage.

For accessing the CLI and getting your team trained on using it, contact support: support@nostos-genomics.com